BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028G02LP1|AL428952
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1740 0.0
>3x_Contig1800
Length = 38778
Score = 1740 bits (876), Expect = 0.0
Identities = 886/890 (99%), Gaps = 1/890 (0%)
Strand = Plus / Minus
Query: 1 gttcttataattatatcgcaatctatktcgttgcgcttgttttatcacaaagtgaaagta 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 36250 gttcttataattatatcgcaatctatgtcgttgcgcttgttttatcacaaagtgaaagta 36191
Query: 61 ttaccatgccaagttgtttaacgcagactcatcgatattcgaagaggcccctaacttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36190 ttaccatgccaagttgtttaacgcagactcatcgatattcgaagaggcccctaacttctc 36131
Query: 121 agtacaagactaattagagaagtgttcaagaagtataacactcgcaattagtgttgttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36130 agtacaagactaattagagaagtgttcaagaagtataacactcgcaattagtgttgttcg 36071
Query: 181 aaatgcttcaccagtgacccttcaggatttagaagtgcaggaacacagtacttaacgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36070 aaatgcttcaccagtgacccttcaggatttagaagtgcaggaacacagtacttaacgtgg 36011
Query: 241 tatccatgagcctgtcaaaattattgcagaagagtcacaggacgacgaaaagatgagaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36010 tatccatgagcctgtcaaaattattgcagaagagtcacaggacgacgaaaagatgagaga 35951
Query: 301 agaaaagctaaaggatgcctatcttactgcagtcttaaaacattggctgggctatattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35950 agaaaagctaaaggatgcctatcttactgcagtcttaaaacattggctgggctatattct 35891
Query: 361 acagacttcttaacaaaaaccagcacactcttaagtacagattaactgcggttcattctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35890 acagacttcttaacaaaaaccagcacactcttaagtacagattaactgcggttcattctg 35831
Query: 421 gttacgtgtgtgggctccaagcttttcagtagacagtaagcggtacatcgaatgthactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 35830 gttacgtgtgtgggctccaagcttttcagtagacagtaagcggtacatcgaatgtaactt 35771
Query: 481 gtcagttgtcaacagtaaagttactattgaattgaaatgggagatcagcagtccctttgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35770 gtcagttgtcaacagtaaagttactattgaattgaaatgggagatcagcagtccctttgt 35711
Query: 541 tgacgttagagatgttacaaaaagctcgtattaccgttaaaagacccgaactaaactcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35710 tgacgttagagatgttacaaaaagctcgtattaccgttaaaagacccgaactaaactcag 35651
Query: 601 aaagatagttgtggacaccatactaatcccttttgtcggatattgctaatatcatccacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35650 aaagatagttgtggacaccatactaatcccttttgtcggatattgctaatatcatccacg 35591
Query: 661 amaatttcccaaatcttagaggaagattgttcgtggcattcctggtaacgttagagatcg 720
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35590 aaaatttcccaaatcttagaggaagattgttcgtggcattcctggtaacgttagagatcg 35531
Query: 721 aaaagaaatcatgtacatcagacagctcaagaactcaaaagctcttgcatatggacttca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35530 aaaagaaatcatgtacatcagacagctcaagaactcaaaagctcttgcatatggacttca 35471
Query: 781 tcaacctggataatccattattggcgc-gtcgatcaaatcttgagagccaccggcagaaa 839
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 35470 tcaacctggataatccattattggcgcagtcgatcaaatcttgagagccaccggcagaaa 35411
Query: 840 agcttgaatttttgttttggactccaacctcctgttttatatgcctcttt 889
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35410 agcttgaatttttgttttggactccaacctcctgttttatatgcctcttt 35361
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5742
Number of Sequences: 1807
Number of extensions: 5742
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)